Introduction
NYU's MicroArray Database is a bioinformatics data analysis tool, often referred to as "MAD" or "NYU-MAD". Users connected to NYU-MAD can run experiment data analysis on a remote server. This documentation is a guide to NYU-MAD's features, and should serve as a manual for using the tool. Before anything else, make sure you have an installed, working toolkit. If not, acquire one from the Downloads & Installation page.
Once you've got a working toolkit, launch the application using the batch file available on the download page. If everything has gone smoothly, you should be presented with a login dialog.
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Logging In
 The login dialog. |
Enter your username and password for the database and click "OK" to proceed.
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Main Window
 The main window. |
From the main window, users have the option to load experiment parameters, protocols, and microarray data.
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Experiments Panel
 The experiments panel. |
Select "Experiments" from the radio button group near the top-left of the main window. Click
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Protocols Panel
 The protocols panel. |
Select "Protocols" from the radio button group near the top-left of the main window.
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Arrays Panel
 The arrays panel. |
Select "Arrays" from the radio button group near the top-left of the main window.
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Array Data Window
 The array data window. |
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Development Tasks Window
 The development tasks window. |
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